readOneProteomDIA reads and processes data from a single DIA
proteomics sample, applying filtering and data transformation steps.
Usage
readOneProteomDIA(inputTab, sampleName)
Arguments
- inputTab
A data.table or data.frame containing the
input data.
- sampleName
A character string specifying the sample name.
Value
A data.table containing the processed data with columns for
intensity, UniProt ID, and gene name.
Details
This function processes DIA proteomics data for a single sample by filtering
out rows with non-quantitative data, converting character values to numeric,
and renaming columns for consistency. It also ensures that each protein group
has a unique identifier.